piccal/rms_analysis.py

##| Copyright: (C) 2019-2020 Kevin Larke <contact AT larke DOT org> 
##| License: GNU GPL version 3.0 or above. See the accompanying LICENSE file.
import os,types,json,pickle,types
from scipy.io import wavfile
from scipy.signal import stft
import numpy as np
from common import parse_yaml_cfg


def calc_harm_bins( srate, binHz, midiPitch, harmN ):

    semi_tone     = 1.0/12
    quarter_tone  = 1.0/24
    eigth_tone    = 1.0/48
    band_width_st = 3.0/48  # 3/8 tone
    
    fundHz     = (13.75 * pow(2.0,(-9.0/12.0))) * pow(2.0,(midiPitch / 12))
    fund_l_binL   = [int(round(fundHz * pow(2.0,-band_width_st) * i/binHz)) for i in range(1,harmN+1)]
    fund_m_binL   = [int(round(fundHz *         i/binHz)) for i in range(1,harmN+1)]
    fund_u_binL   = [int(round(fundHz * pow(2.0, band_width_st) * i/binHz)) for i in range(1,harmN+1)]

    for i in range(len(fund_m_binL)):
        if fund_l_binL[i] >= fund_m_binL[i] and fund_l_binL[i] > 0:
            fund_l_binL[i] = fund_m_binL[i] - 1

        if fund_u_binL[i] <= fund_m_binL[i] and fund_u_binL[i] < len(fund_u_binL)-1:
            fund_u_binL[i] = fund_m_binL[i] + 1
    
    return fund_l_binL, fund_m_binL, fund_u_binL
    
def rms_to_db( xV, rms_srate, dbLinRef ):
    #dbWndN = int(round(refWndMs * rms_srate / 1000.0))
    #dbRef = ref = np.mean(xV[0:dbWndN])

    #print("DB REF:",dbLinRef, min(xV), np.argmin(xV))
    rmsDbV = 20.0 * np.log10( (xV+np.nextafter(0,1)) / dbLinRef )

    return rmsDbV

def audio_rms( srate, xV, rmsWndMs, hopMs, dbLinRef  ):

    wndSmpN = int(round( rmsWndMs * srate / 1000.0))
    hopSmpN = int(round( hopMs    * srate / 1000.0))

    xN   = xV.shape[0]
    
    yN   = int(((xN - wndSmpN) / hopSmpN) + 1)

    assert( yN > 0)
    yV   = np.zeros( (yN, ) )

    assert( wndSmpN > 1 )

    i = 0
    j = 0
    while i < xN and j < yN:

        if i == 0:
            yV[j] = np.sqrt(xV[0]*xV[0]) 
        elif i < wndSmpN:
            yV[j] = np.sqrt( np.mean( xV[0:i] * xV[0:i] ) )
        else:
            yV[j] = np.sqrt( np.mean( xV[i-wndSmpN:i] * xV[i-wndSmpN:i] ) )

        i += hopSmpN
        j += 1

    rms_srate = srate / hopSmpN
    return rms_to_db( yV[0:j], rms_srate, dbLinRef ), rms_srate


def audio_stft_rms( srate, xV, rmsWndMs, hopMs, dbLinRef, spectrumIdx ):
    
    wndSmpN = int(round( rmsWndMs * srate / 1000.0))
    hopSmpN = int(round( hopMs    * srate / 1000.0))
    binHz   = srate / wndSmpN
    
    f,t,xM = stft( xV, fs=srate, window="hann", nperseg=wndSmpN, noverlap=wndSmpN-hopSmpN, return_onesided=True )

    specHopIdx = int(round( spectrumIdx ))    
    specV = np.sqrt(np.abs(xM[:, specHopIdx ]))
    
    mV = np.zeros((xM.shape[1]))

    for i in range(xM.shape[1]):
        mV[i] = np.max(np.sqrt(np.abs(xM[:,i])))


    rms_srate = srate / hopSmpN
    mV = rms_to_db( mV, rms_srate, dbLinRef )
        
    return mV, rms_srate, specV, specHopIdx, binHz


def audio_harm_rms( srate, xV, rmsWndMs, hopMs, dbLinRef, midiPitch, harmCandN, harmN  ):

    wndSmpN   = int(round( rmsWndMs * srate / 1000.0))
    hopSmpN   = int(round( hopMs    * srate / 1000.0))

    binHz   = srate / wndSmpN

    #print( "STFT:", rmsWndMs, hopMs, wndSmpN, hopSmpN, wndSmpN-hopSmpN )
    
    f,t,xM = stft( xV, fs=srate, window="hann", nperseg=wndSmpN, noverlap=wndSmpN-hopSmpN, return_onesided=True )

    harmLBinL,harmMBinL,harmUBinL = calc_harm_bins( srate, binHz, midiPitch, harmCandN )
    
    rmsV = np.zeros((xM.shape[1],))


    for i in range(xM.shape[1]):
        mV = np.sqrt(np.abs(xM[:,i]))

        pV = np.zeros((len(harmLBinL,)))
        
        for j,(b0i,b1i) in enumerate(zip( harmLBinL, harmUBinL )):
            pV[j] = np.max(mV[b0i:b1i])

        rmsV[i] = np.mean( sorted(pV)[-harmN:] )
            
            
        
    rms_srate = srate / hopSmpN
    rmsV = rms_to_db( rmsV, rms_srate, dbLinRef )
    return rmsV, rms_srate, binHz
    
def measure_duration_ms( rmsV, rms_srate, peak_idx, end_idx, decay_pct ):
    """
    Calcuate the time it takes for a note to decay from the peak at
    rmsV[peak_idx] dB to 'decay_pct' percent of the peak value.
    """
    
    pkRmsDb     = rmsV[ peak_idx ]

    # calc the note turn-off (offset) db as a percentage of the peak amplitude
    offsetRmsDb = pkRmsDb * decay_pct / 100.0

    # calc the sample index where the note is off
    offset_idx  = peak_idx + np.argmin( np.abs(rmsV[peak_idx:end_idx] - offsetRmsDb) )

    
    # calc the duration of the note
    dur_ms =  int(round((offset_idx - peak_idx) * 1000.0 / rms_srate))

    #print(pkRmsDb, offsetRmsDb, peak_idx, offset_idx, end_idx, dur_ms, rms_srate)
    
    return dur_ms


def select_first_stable_note_by_dur( durMsL, minDurMs=800 ):

    first_stable_idx = None
    for i,durMs in enumerate(durMsL):
        if durMs > minDurMs and first_stable_idx is None:
            first_stable_idx = i
        else:
            if durMs < minDurMs:
                first_stable_idx = None
                
    return first_stable_idx

def select_first_stable_note_by_delta_db_1( pkDbL, pkUsL, maxPulseUs=0.1 ):

    wndN = 5
    aL = []
    dV = np.diff(pkDbL) / pkDbL[1:]
    
    for ei in range(wndN,len(pkDbL)):
        xV =  dV[ei-wndN:ei]
        avg = np.mean(np.abs(xV))
        aL.append(avg)

    k = np.argmin(np.abs(np.array(pkUsL) - maxPulseUs))

    print(aL)
    print(k)

    
    for i in range(k,0,-1):
        if aL[i] > maxDeltaDb:
            return i + 1

    return None
    
    
def select_first_stable_note_by_delta_db( pkDbL, pkUsL=None, maxPulseUs=0.1 ):

    wndN = 5
    
    dV = np.diff(pkDbL) / pkDbL[1:]

    
    for ei in range(wndN,len(pkDbL)):
        xV =  dV[ei-wndN:ei]
        avg = np.mean(np.abs(xV))

        if avg < .1:
            return (ei-wndN)+1


    return None

def note_stats( r, decay_pct=50.0, extraDurSearchMs=500 ):
    """ Collect some statistics and markers for each note in the sequence. """
    statsL = []

    srate = r.rms_srate

    qmax = 0

    
    
    for i,(begSmpMs, endSmpMs) in enumerate(r.eventTimeL):

        begSmpIdx = int(round(srate * begSmpMs / 1000.0))
        endSmpIdx = int(round(srate * (endSmpMs + extraDurSearchMs) / 1000.0))
        pkSmpIdx  = r.pkIdxL[i]

        
        durMs = measure_duration_ms( r.rmsDbV, srate, pkSmpIdx, endSmpIdx, decay_pct )

        bi = pkSmpIdx
        ei = pkSmpIdx + int(round(durMs * srate / 1000.0))

        qualityCoeff =  np.sum(r.rmsDbV[bi:ei]) + np.sum(r.tdRmsDbV[bi:ei])
        if qualityCoeff > qmax:
            qmax = qualityCoeff

        if ei-bi == 0:
            tdRmsDb_v = 0.0 if bi >= len(r.tdRmsDbV) else np.mean(r.tdRmsDbV[bi])
            hmRmsDb_v = 0.0 if bi >= len(r.rmsDbV)   else np.mean(r.rmsDbV[bi])            
            durAvgDb = (hmRmsDb_v + tdRmsDb_v)/2.0
        else:
            tdRmsDb_u = 0.0 if ei >= len(r.tdRmsDbV) else np.mean(r.tdRmsDbV[bi:ei])
            hmRmsDb_u = 0.0 if ei >= len(r.rmsDbV)   else np.mean(r.rmsDbV[bi:ei])
            durAvgDb = (hmRmsDb_u + tdRmsDb_u)/2.0

        statsL.append( types.SimpleNamespace(**{
            'begSmpSec':begSmpIdx/srate,
            'endSmpSec':endSmpIdx/srate,
            'pkSmpSec':pkSmpIdx/srate,
            'durMs':durMs,
            'pkDb':r.pkDbL[i],
            'pulse_us':r.pkUsL[i],
            'quality':qualityCoeff,
            'durAvgDb':durAvgDb }))

    for i,r in enumerate(statsL):
        statsL[i].quality = 0 if qmax <= 0 else statsL[i].quality / qmax
                           
    
    return statsL
        
        
        
               
def locate_peak_indexes( xV, xV_srate, eventMsL, audioFn="" ):

    pkIdxL = []
    for i, (begMs, endMs) in enumerate(eventMsL):

        begSmpIdx = int(begMs * xV_srate / 1000.0)
        endSmpIdx = int(endMs * xV_srate / 1000.0)

        if endSmpIdx != begSmpIdx:
            pkIdxL.append( begSmpIdx + np.argmax( xV[begSmpIdx:endSmpIdx] ) )
        else:
            print("Missing peak %i : begween beg:%i ms end:%i ms : %s" % (i, begMs, endMs, audioFn ))
            pkIdxL.append( None )

    return pkIdxL


def key_info_dictionary( keyMapL=None, yamlCfgFn=None):

    if yamlCfgFn is not None:
        cfg = parse_yaml_cfg(yamlCfgFn)

        keyMapL = cfg.key_mapL

    kmD = {}
    for d in keyMapL:
        kmD[ d['midi'] ] = types.SimpleNamespace(**d)

    return kmD

def rms_analyze_one_rt_note( sigV, srate, begMs, endMs, midi_pitch, rmsWndMs=300, rmsHopMs=30, dbLinRef=0.001, harmCandN=5, harmN=3, durDecayPct=40 ):

    sigV = np.squeeze(sigV)

    td_rmsDbV, td_srate = audio_rms( srate, sigV, rmsWndMs, rmsHopMs, dbLinRef )

    begSmpIdx = int(round(begMs * td_srate/1000))
    endSmpIdx = int(round(endMs * td_srate/1000))
    
    td_pk_idx = begSmpIdx + np.argmax(td_rmsDbV[begSmpIdx:endSmpIdx])

    td_durMs = measure_duration_ms( td_rmsDbV, td_srate, td_pk_idx, len(sigV)-1, durDecayPct )

    hm_rmsDbV, hm_srate, binHz = audio_harm_rms( srate, sigV, rmsWndMs, rmsHopMs, dbLinRef, midi_pitch, harmCandN, harmN  )

    begSmpIdx = int(round(begMs * hm_srate/1000))
    endSmpIdx = int(round(endMs * hm_srate/1000))
    hm_pk_idx = begSmpIdx + np.argmax(hm_rmsDbV[begSmpIdx:endSmpIdx])

    hm_durMs = measure_duration_ms( hm_rmsDbV, hm_srate, hm_pk_idx, len(sigV)-1, durDecayPct )

    tdD = { "rmsDbV":td_rmsDbV.tolist(), "srate":td_srate, "pk_idx":int(td_pk_idx), "db":float(td_rmsDbV[td_pk_idx]), "durMs":td_durMs }
    hmD = { "rmsDbV":hm_rmsDbV.tolist(), "srate":hm_srate, "pk_idx":int(hm_pk_idx), "db":float(hm_rmsDbV[hm_pk_idx]), "durMs":hm_durMs }
    
    return { "td":tdD, "hm":hmD }

def rms_analyze_one_rt_note_wrap( audioDev, annBegMs, annEndMs, midi_pitch, noteOffDurMs, rmsAnalysisD ):

    resD = None 
    buf_result = audioDev.linear_buffer()

    if buf_result:

        sigV = buf_result.value

        if len(sigV.shape) > 1:
            sigV = sigV[:,0].squeeze()
        
        

        # get the annotated begin and end of the note as sample indexes into sigV
        bi = int(round(annBegMs * audioDev.srate / 1000))
        ei = int(round(annEndMs * audioDev.srate / 1000))

        # calculate half the length of the note-off duration in samples
        noteOffSmp_o_2 = int(round( (noteOffDurMs/2)  * audioDev.srate / 1000))

        # widen the note analysis space noteOffSmp_o_2 samples pre/post the annotated begin/end of the note
        bi = max(0,bi - noteOffSmp_o_2)
        ei = min(ei+noteOffSmp_o_2,sigV.shape[0]-1)


        ar = types.SimpleNamespace(**rmsAnalysisD)

        # shift the annotatd begin/end of the note to be relative to  index bi
        begMs = noteOffSmp_o_2 * 1000 / audioDev.srate
        endMs = begMs + (annEndMs - annBegMs)

        #print("MEAS:",begMs,endMs,bi,ei,sigV.shape,audioDev.is_recording_enabled(),ar)


        # analyze the note
        resD  = rms_analyze_one_rt_note( sigV[bi:ei], audioDev.srate, begMs, endMs, midi_pitch, rmsWndMs=ar.rmsWndMs, rmsHopMs=ar.rmsHopMs, dbLinRef=ar.dbLinRef, harmCandN=ar.harmCandN, harmN=ar.harmN, durDecayPct=ar.durDecayPct )

        #print( "hm:%4.1f %4i  td:%4.1f %4i" %  (resD['hm']['db'], resD['hm']['durMs'], resD['td']['db'], resD['td']['durMs']))

    return resD

def calibrate_rms( sigV, srate, beg_ms, end_ms ):

    bi = int(round(beg_ms * srate / 1000))
    ei = int(round(end_ms * srate / 1000))
    rms = np.sqrt( np.mean( sigV[bi:ei] * sigV[bi:ei] ))

    return 20.0*np.log10( rms / 0.002 )
    

def calibrate_recording_analysis( inDir ):

    jsonFn  = os.path.join(inDir, "meas.json" )
    audioFn = os.path.join(inDir, "audio.wav" )

    with open(jsonFn,"r") as f:
        r = json.load(f)

    measD = r['measD']
    cfg   = types.SimpleNamespace(**r['cfg'])
    annL  = r['annoteL']
    anlD  = {}
    
    n = 0
    for midi_pitch,measL in measD.items():
        n += len(measL)
        anlD[int(midi_pitch)] = []

    srate, signalM  = wavfile.read(audioFn)
    sigV  = signalM / float(0x7fff)

    anlr = types.SimpleNamespace(**cfg.analysisD)

    tdRmsDbV, td_srate = audio_rms( srate, sigV, anlr.rmsWndMs, anlr.rmsHopMs, anlr.dbLinRef )

    # for each measured pitch 
    for midi_pitch,measL in measD.items():

        # for each measured note at this pitch
        for mi,d in enumerate(measL):

            mr = types.SimpleNamespace(**d)
            
            # locate the associated annotation reocrd
            for annD in annL:
                ar = types.SimpleNamespace(**annD)

                if ar.midi_pitch == mr.midi_pitch and ar.beg_ms==mr.beg_ms and ar.end_ms==mr.end_ms:
                    assert( ar.pulse_us == mr.pulse_us )

                    bi = int(round(ar.beg_ms * td_srate / 1000))
                    ei = int(round(ar.end_ms * td_srate / 1000))
                    db = np.mean(tdRmsDbV[bi:ei])

                    db = calibrate_rms( sigV, srate, ar.beg_ms, ar.end_ms )
                    
                    anlD[int(midi_pitch)].append({ 'pulse_us':ar.pulse_us, 'db':db, 'meas_idx':mi })

                    break


    return anlD
                    
        


def rms_analysis_main( inDir, midi_pitch, rmsWndMs=300, rmsHopMs=30, dbLinRef=0.001, harmCandN=5, harmN=3, durDecayPct=40 ):

    # form the audio and meta data file names
    seqFn     = os.path.join( inDir, "seq.json")
    audioFn   = os.path.join( inDir, "audio.wav")
    
    # read the meta data file
    with open( seqFn, "rb") as f:
        r = json.load(f)
    
    # rad the auido file
    srate, signalM  = wavfile.read(audioFn)

    # convert the audio signal vector to contain only the first (left) channel
    if len(signalM.shape)>1:
        signalM = signalM[:,0].squeeze()

    # convert the auido file to floats in range [-1.0 to 1.0]
    sigV  = signalM / float(0x7fff)

    # calc. the RMS signal
    tdRmsDbV, rms0_srate = audio_rms( srate, sigV, rmsWndMs, rmsHopMs, dbLinRef )

    # locate the peaks in the RMS signal
    tdPkIdxL = locate_peak_indexes( tdRmsDbV, rms0_srate,  r['eventTimeL'], audioFn )

    # sum the first harmN harmonics to form a envelope of the audio signal (this is an alternative to the RMS signal)
    rmsDbV, rms_srate, binHz = audio_harm_rms( srate, sigV, rmsWndMs, rmsHopMs, dbLinRef, midi_pitch, harmCandN, harmN  )

    # locate the peaks in the harmonic sum signal
    pkIdxL = locate_peak_indexes( rmsDbV, rms_srate, r['eventTimeL'], audioFn )    

    # form the 'holdDutyPctlL' hold duty cycle transition point list
    holdDutyPctL = None
    if 'holdDutyPct' in r:
        holdDutyPctL = [ (0, r['holdDutyPct']) ]
    else:
        holdDutyPctL = r['holdDutyPctL']

    eventN = len(r['eventTimeL'])
    assert( len(tdPkIdxL) == eventN and len(pkIdxL) == eventN )
        
    # filter out all missing events that have no peak
    flL        = [ (tdPkIdxL[i] is not None) and  (pkIdxL[i] is not None)  for i in range(eventN) ]
    eventTimeL = [ r['eventTimeL'][i]       for i in range(eventN) if  flL[i] ]
    tdPkDbL    = [ tdRmsDbV[tdPkIdxL[i]]    for i in range(eventN) if  flL[i] ]
    pkDbL      = [ rmsDbV[ pkIdxL[i]]       for i in range(eventN) if  flL[i] ]
    #pkUsL      = [ r['pulseUsL'][pkIdxL[i]] for i in range(eventN) if  flL[i] ]
    tdPkIdxL   = [ i                        for i in tdPkIdxL  if i is not None ]
    pkIdxL     = [ i                        for i in pkIdxL    if i is not None ]
    
    # form the result record
    r = types.SimpleNamespace(**{
        "audio_srate":srate,
        "eventTimeMsL": eventTimeL, #r['eventTimeL'],
        "tdRmsDbV": tdRmsDbV,
        "tdPkIdxL": tdPkIdxL,
        "tdPkDbL": tdPkDbL,         # [ tdRmsDbV[i] for i in tdPkIdxL ],
        "binHz": binHz,
        "rmsDbV": rmsDbV,
        "rms_srate":rms_srate,
        "pkIdxL":pkIdxL,            # pkIdxL[ len(pulsUsL) ] - indexes into rmsDbV[] of peaks
        "eventTimeL": eventTimeL, #r['eventTimeL'],
        "holdDutyPctL":holdDutyPctL,
        'pkDbL': pkDbL, # [ rmsDbV[ i ] for i in pkIdxL ],
        'pkUsL': r['pulseUsL'] })  # r['pulseUsL']

    # 
    statsL = note_stats(r,durDecayPct)

    setattr(r,"statsL",   statsL )

    return r


def rms_analysis_main_all( inDir, cacheFn, rmsWndMs=300, rmsHopMs=30, dbLinRef=0.001, harmCandN=5, harmN=3, durDecayPct=40 ):

    if os.path.isfile(cacheFn):
        print("READING analysis cache file: %s" % (cacheFn))
        with open(cacheFn,"rb") as f:
            rD = pickle.load(f)
            return rD
    
    
    folderL = os.listdir(inDir)

    rD = {}

    for folder in folderL:

        pathL = folder.split(os.sep)

        midi_pitch = int(pathL[-1])

        print(midi_pitch)

        path = os.path.join(inDir,folder,'0')

        if os.path.isdir(path) and os.path.isfile(os.path.join(os.path.join(path,"seq.json"))):
            r = rms_analysis_main( path, midi_pitch, rmsWndMs=rmsWndMs, rmsHopMs=rmsHopMs, dbLinRef=dbLinRef, harmCandN=harmCandN, harmN=harmN, durDecayPct=durDecayPct )

            rD[ midi_pitch ] = r


    with open(cacheFn,"wb") as f:
        pickle.dump(rD,f)
        
    return rD



def samples_to_linear_residual( usL, dbL, pointsPerLine=5 ):
    # Score the quality of each sampled point by measuring the
    # quality of fit to a local line. 
    
    scoreD = { us:[] for us in usL }

    pointsPerLine = 5

    i = pointsPerLine
    
    # for each sampled point
    while i < len(usL):
        # beginning with sample at index 'pointsPerLine' 
        if i >= pointsPerLine:
            
            k     = i - pointsPerLine

            # get the x (us) and y (db) sample values
            xL,yL = zip(*[ ((usL[k+j],1.0), dbL[k+j])  for j in range(pointsPerLine)])
            xV    = np.array(xL)
            yV    = np.array(yL)
            
            # fit the sampled point to a line
            m,c   = np.linalg.lstsq(xV,yV,rcond=None)[0]

            # calc the residual of the fit at each point
            resV  = (m*xV+c)[:,0] - yV

            # assign the residual to the associated point in scoreD[x]
            for j in range(pointsPerLine):
                scoreD[usL[k+j]].append(resV[j])
            
        i += 1
            

    scoreL = []

    # calc the mean of the residuals for each point
    # (most points were used in 'pointsPerLine' line estimations
    #  and so they will have 'pointsPerLine' residual values)
    for us in usL:

        resL = scoreD[us]
        
        if len(resL) == 0:
            scoreL.append(0.0)
        elif len(resL) == 1:
            scoreL.append(resL[0])
        else:
            scoreL.append(np.mean(resL))

    # their should be one mean resid. value for each sampled point
    assert( len(scoreL) == len(usL) )
    return np.array(scoreL)
        
def write_audacity_label_files( inDir, analysisArgsD, reverseFl=True ):

    pitchDirL = os.listdir(inDir)

    for pitchDir in pitchDirL:
        
        folderL = pitchDir.split(os.sep)

        midi_pitch = int(folderL[-1])

        pitchDir = os.path.join(inDir,pitchDir)

        takeDirL = os.listdir(pitchDir)

        for takeFolder in takeDirL:

            takeDir = os.path.join(pitchDir,takeFolder)

            if not os.path.isfile(os.path.join(takeDir,"seq.json")):
                continue

            r = rms_analysis_main( takeDir, midi_pitch, **analysisArgsD )

            labelFn = os.path.join(takeDir,"audacity.txt")

            print("Writing:",labelFn)

            with open(labelFn,"w") as f:
                
                for i,s in enumerate(r.statsL):

                    noteIndex = len(r.statsL)-(i+1) if reverseFl else i
                    
                    label = "%i %4.1f %6.1f" % (noteIndex, s.pkDb, s.durMs )
                    
                    f.write("%f\t%f\t%s\n" % ( s.begSmpSec, s.endSmpSec, label ))