libcm/src/cmProc5.c

#include "cmPrefix.h"
#include "cmGlobal.h"
#include "cmRpt.h"
#include "cmErr.h"
#include "cmCtx.h"
#include "cmMem.h"
#include "cmMallocDebug.h"
#include "cmLinkedHeap.h"
#include "cmFloatTypes.h"
#include "cmComplexTypes.h"
#include "cmFileSys.h"
#include "cmJson.h"
#include "cmSymTbl.h"
#include "cmAudioFile.h"
#include "cmText.h"
#include "cmProcObj.h"
#include "cmProcTemplate.h"
#include "cmMath.h"
#include "cmFile.h"
#include "cmTime.h"
#include "cmMidi.h"
#include "cmProc.h"
#include "cmProc2.h"
#include "cmProc5.h"

#include "cmVectOps.h"


//=======================================================================================================================
cmGoertzel* cmGoertzelAlloc( cmCtx* c, cmGoertzel* p, double srate, const double* fcHzV, unsigned chCnt, unsigned procSmpCnt, unsigned hopSmpCnt, unsigned wndSmpCnt )
{
  cmGoertzel* op = cmObjAlloc(cmGoertzel,c,p);
  
  op->shb = cmShiftBufAlloc(c,NULL,0,0,0);

  if( srate > 0 )  
    if( cmGoertzelInit(op,srate,fcHzV,chCnt,procSmpCnt,wndSmpCnt,hopSmpCnt) != cmOkRC )
      cmGoertzelFree(&op);

  return op;
}

cmRC_t cmGoertzelFree( cmGoertzel** pp )
{
  cmRC_t rc = cmOkRC;
  if( pp==NULL || *pp==NULL )
    return rc;

  cmGoertzel* p = *pp;
  if((rc = cmGoertzelFinal(p)) != cmOkRC )
    return rc;

  cmShiftBufFree(&p->shb);
  cmMemFree(p->ch);
  cmMemFree(p->wnd);
  cmObjFree(pp);
  return rc;

}

cmRC_t cmGoertzelInit( cmGoertzel* p, double srate, const double* fcHzV, unsigned chCnt, unsigned procSmpCnt, unsigned hopSmpCnt, unsigned wndSmpCnt )
{
  cmRC_t rc;
  unsigned i;

  if((rc = cmGoertzelFinal(p)) != cmOkRC )
    return rc;

  p->ch    = cmMemResizeZ(cmGoertzelCh,p->ch,chCnt);
  p->chCnt = chCnt;
  p->srate = srate;
  p->wnd   = cmMemResizeZ(cmSample_t,p->wnd,wndSmpCnt);

  cmVOS_Hann(p->wnd,wndSmpCnt);

  cmShiftBufInit(p->shb,procSmpCnt,wndSmpCnt,hopSmpCnt);

  for(i=0; i<p->chCnt; ++i)
  {
    cmGoertzelSetFcHz(p,i,fcHzV[i]);
  }

  return rc;
}

cmRC_t cmGoertzelFinal( cmGoertzel* p )
{ return cmOkRC; }

cmRC_t cmGoertzelSetFcHz( cmGoertzel* p, unsigned chIdx, double hz )
{
  assert( chIdx < p->chCnt );
  p->ch[chIdx].hz   = hz;
  p->ch[chIdx].coeff = 2*cos(2*M_PI*hz/p->srate);
  
  return cmOkRC;
}

cmRC_t cmGoertzelExec( cmGoertzel* p, const cmSample_t* inpV, unsigned procSmpCnt, double* outV, unsigned chCnt )
{
  unsigned i,j;

  while( cmShiftBufExec(p->shb,inpV,procSmpCnt) )
  {
    unsigned   xn = p->shb->wndSmpCnt;
    cmSample_t x[ xn ];

    cmVOS_MultVVV(x,xn,p->wnd,p->shb->outV);

    for(i=0; i<chCnt; ++i)
    {
      cmGoertzelCh* ch = p->ch + i;
    
      ch->s2 = x[0];
      ch->s1 = x[1] + 2 * x[0] * ch->coeff;
      for(j=2; j<xn; ++j)
      {
        ch->s0 = x[j] + ch->coeff * ch->s1 - ch->s2;
        ch->s2 = ch->s1;
        ch->s1 = ch->s0;
      }
    
      outV[i] = ch->s2*ch->s2 + ch->s1*ch->s1 - ch->coeff * ch->s2 * ch->s1;
    }
  }

  return cmOkRC;
}


//=======================================================================================================================
double _cmGoldSigSinc( double t, double T )
{
  double x = t/T;
  return x == 0 ? 1.0 : sin(M_PI*x)/(M_PI*x);         
}

void _cmGoldSigRaisedCos(  cmSample_t* yV, int yN, double sPc, double beta )
{
  int i;
  
  for(i=0; i<yN; ++i)
  {
    double t   = i - yN/2;
    double den = 1 - (4*(beta*beta)*(t*t) / (sPc*sPc));
    double a;
      
    if(fabs(den) < 0.00001 )
      a = 1;
    else
      a = cos(M_PI * beta * t/ sPc ) / den;

    yV[i] = _cmGoldSigSinc(t,sPc) * a;  
  }
}

void _cmGoldSigConv( cmGoldSig_t* p, unsigned chIdx )
{
  int i;
  int sPc = p->a.samplesPerChip;
  int osf = p->a.rcosOSFact;

  // for each bit in the spreading-code
  for(i=0; i<p->mlsN; ++i)
  {
    int j = (i*sPc) + sPc/2;  // index into bbV[] of center of impulse response
    int k = j - (sPc*osf)/2;  // index into bbV[] of start of impulse response
    int h;

    // for each sample in the impulse response
    for(h=0; h<p->rcosN; ++h,++k)
    {
     
      while( k<0 )
        k += p->sigN;

      while( k>=p->sigN )
        k -= p->sigN;

      p->ch[chIdx].bbV[k] += p->ch[chIdx].pnV[i] * p->rcosV[h];     
    }
  }
}

void _cmGoldSigModulate( cmGoldSig_t* p, unsigned chIdx )
{
  unsigned    i;
  double      rps = 2.0 * M_PI * p->a.carrierHz / p->a.srate;
  cmSample_t* yV  = p->ch[chIdx].mdV;
  cmSample_t* bbV = p->ch[chIdx].bbV;

  for(i=0; i<p->sigN; ++i)
    yV[ i ] = bbV[i]*cos(rps*i) + bbV[i]*sin(rps*i);

  // apply a half Hann envelope to the onset/offset of the id signal
  if( p->a.envMs > 0 )
  {
    unsigned   wndMs = p->a.envMs * 2;
    unsigned   wndN  = wndMs * p->a.srate / 1000;
    wndN += wndN % 2 ? 0 : 1;   // force the window length to be odd
    unsigned   wNo2 = wndN/2 + 1;
    cmSample_t wndV[ wndN ];
    cmVOS_Hann(wndV,wndN);
    cmVOS_MultVV(yV,wNo2,wndV);
    cmVOS_MultVV(yV + p->sigN - wNo2, wNo2, wndV + wNo2 - 1);
  }

}

cmGoldSig_t* cmGoldSigAlloc( cmCtx* ctx, cmGoldSig_t* p, const cmGoldSigArg_t* a )
{
  cmGoldSig_t* op = cmObjAlloc(cmGoldSig_t,ctx,p);

  op->fir = cmFIRAllocKaiser(ctx, NULL, 0, 0, 0, 0, 0, 0, 0 );
  
  if( a != NULL )  
    if( cmGoldSigInit(op,a) != cmOkRC )
      cmGoldSigFree(&op);

  return op;

}

cmRC_t cmGoldSigFree( cmGoldSig_t** pp )
{
  cmRC_t rc = cmOkRC;

  if( pp == NULL || *pp == NULL )
    return rc;

  cmGoldSig_t* p = *pp;

  if((rc = cmGoldSigFinal(p)) != cmOkRC )
    return rc;
  
  unsigned i;
  for(i=0; i<p->a.chN; ++i)
  {
    cmMemFree(p->ch[i].bbV);
    cmMemFree(p->ch[i].mdV);
  }

  cmFIRFree(&p->fir);
  cmMemFree(p->ch);
  cmMemFree(p->rcosV);
  cmMemFree(p->pnM);
  cmMemFree(p);
  *pp = NULL;

  return rc;
}

cmRC_t cmGoldSigInit( cmGoldSig_t* p, const cmGoldSigArg_t* a )
{
  cmRC_t      rc = cmOkRC;
  unsigned    i;
  
  p->a      = *a;                                            // store arg recd
  p->ch     = cmMemResizeZ(cmGoldSigCh_t,p->ch,a->chN);  // alloc channel array
  p->mlsN   = (1 << a->lfsrN) - 1;                           // calc spreading code length
  p->rcosN  = a->samplesPerChip * a->rcosOSFact;             // calc rcos imp. resp. length
  p->rcosN += (p->rcosN % 2)==0;                             // force rcos imp. length odd               
  p->rcosV  = cmMemResizeZ(cmSample_t,p->rcosV,p->rcosN);  // alloc rcos imp. resp. vector
  p->pnM    = cmMemResizeZ(int,p->pnM,p->mlsN*a->chN);   // alloc spreading-code mtx
  p->sigN   = p->mlsN * a->samplesPerChip;                   // calc audio signal length

  // generate spreading codes
  if( cmGenGoldCodes(a->lfsrN, a->mlsCoeff0, a->mlsCoeff1, a->chN, p->pnM, p->mlsN ) == false )
  {
    rc = cmCtxRtCondition(&p->obj,cmSubSysFailRC,"Unable to generate sufficient balanced Gold codes.");
    goto errLabel;
  }

  // generate the rcos impulse response
  _cmGoldSigRaisedCos(p->rcosV,p->rcosN,a->samplesPerChip,a->rcosBeta);

  if(1)
  {
    double   passHz = 20000.0;
    double   stopHz = 17000.0;
    double   passDb = 1.0;
    double   stopDb = 90.0;
    unsigned flags  = 0;
    
    if( cmFIRInitKaiser(p->fir, 64, a->srate, passHz, stopHz, passDb, stopDb, flags ) != cmOkRC )
    {
      rc = cmCtxRtCondition(&p->obj,cmSubSysFailRC,"Unable to allocate internal FIR.");
      goto errLabel;
    }

    p->rcosN = p->fir->coeffCnt;
    p->rcosV = cmMemResizeZ(cmSample_t,p->rcosV,p->rcosN);
    cmVOS_CopyD(p->rcosV,p->rcosN,p->fir->coeffV);
    
  }
  

  // for each channel
  for(i=0; i<a->chN; ++i)
  {
    // Note: if (i*p->mlsN) is set to 0 in the following line then all channels
    // will use the same spreading code.
    p->ch[i].pnV = p->pnM + (i*p->mlsN);                        // get ch. spreading code
    p->ch[i].bbV = cmMemResizeZ(cmSample_t,p->ch[i].bbV,p->sigN); // alloc baseband signal vector
    p->ch[i].mdV = cmMemResizeZ(cmSample_t,p->ch[i].mdV,p->sigN); // alloc output audio vector

    // Convolve spreading code with rcos impulse reponse to form baseband signal.
    _cmGoldSigConv(p, i );     

    // Modulate baseband signal to carrier frq. and apply attack/decay envelope.
    _cmGoldSigModulate(p, i );
  }

 errLabel:
  if((rc = cmErrLastRC(&p->obj.err)) != cmOkRC )
    cmGoldSigFree(&p);

  return rc;
}

cmRC_t cmGoldSigFinal( cmGoldSig_t* p )
{ return cmFIRFinal(p->fir); }

cmRC_t cmGoldSigWrite( cmCtx* ctx, cmGoldSig_t* p, const char* fn )
{
  cmVectArray_t* vap = NULL;
  unsigned       i;

  vap = cmVectArrayAlloc(ctx,kSampleVaFl);

  for(i=0; i<p->a.chN; ++i)
  {
    cmVectArrayAppendS(vap,p->ch[i].bbV,p->sigN);
    cmVectArrayAppendS(vap,p->ch[i].mdV,p->sigN);
  }

  cmVectArrayWrite(vap,fn);

  cmVectArrayFree(&vap);

  return cmOkRC;
}


cmRC_t cmGoldSigGen( cmGoldSig_t* p, unsigned chIdx, unsigned prefixN, unsigned dsN, unsigned *bsiV, unsigned bsiN, double noiseGain, cmSample_t** yVRef, unsigned* yNRef )
{
  unsigned    yN = prefixN + bsiN * (p->sigN + dsN);
  cmSample_t* yV = cmMemAllocZ(cmSample_t,yN);
  unsigned    i;

  cmVOS_Random(yV, yN, -noiseGain, noiseGain );

  for(i=0; i<bsiN; ++i)
  {
    bsiV[i] = prefixN + i*(p->sigN + dsN);
    
    cmVOS_AddVV(yV + bsiV[i], p->sigN, p->ch[chIdx].mdV );
  }
  
  if( yVRef != NULL )
    *yVRef = yV;

  if( yNRef != NULL )
    *yNRef = yN;

  return cmOkRC;  
}


//=======================================================================================================================
cmPhat_t*   cmPhatAlloc(  cmCtx* ctx, cmPhat_t* ap, unsigned chN, unsigned hN, float alpha, unsigned mult, unsigned flags )
{
  cmPhat_t* p = cmObjAlloc(cmPhat_t,ctx,ap);

  // The FFT buffer and the delay line is at least twice the size of the 
  // id signal. This will guarantee that at least one complete id signal
  // is inside the buffer.  In practice it means that it is possible
  // that there will be two id's in the buffer therefore if there are
  // two correlation spikes it is important that we take the second.
  unsigned fhN = cmNextPowerOfTwo(mult*hN);

  // allocate the FFT object
  cmFftAllocSR(ctx,&p->fft,NULL,fhN,kToPolarFftFl);
  cmIFftAllocRS(ctx,&p->ifft,fhN/2 + 1 );

  // allocate the vect array
  p->ftVa = cmVectArrayAlloc(ctx, kSampleVaFl );
  
  if( chN != 0 )  
    if( cmPhatInit(p,chN,hN,alpha,mult,flags) != cmOkRC )
      cmPhatFree(&p);

  return p;

}

cmRC_t   cmPhatFree(   cmPhat_t** pp )
{
  cmRC_t rc = cmOkRC;

  if( pp == NULL || *pp == NULL )
    return rc;

  cmPhat_t* p = *pp;
  if((rc = cmPhatFinal(p)) != cmOkRC )
    return rc;

  cmMemFree(p->t0V);
  cmMemFree(p->t1V);
  cmMemFree(p->dV);
  cmMemFree(p->xV);
  cmMemFree(p->fhM);
  cmMemFree(p->mhM);
  cmMemFree(p->wndV);
  cmObjFreeStatic(cmFftFreeSR, cmFftSR, p->fft);
  cmObjFreeStatic(cmIFftFreeRS, cmIFftRS, p->ifft);
  cmVectArrayFree(&p->ftVa);
  cmObjFree(pp);

  return rc;

}


cmRC_t   cmPhatInit(  cmPhat_t* p, unsigned chN, unsigned hN, float alpha, unsigned mult, unsigned flags )
{
  cmRC_t   rc = cmOkRC;
  if((rc = cmPhatFinal(cmOkRC)) != cmOkRC )
    return rc;

  p->fhN = cmNextPowerOfTwo(mult*hN);
  
  if((cmFftInitSR(&p->fft, NULL, p->fhN, kToPolarFftFl)) != cmOkRC )
    return rc;

  if((cmIFftInitRS(&p->ifft, p->fft.binCnt )) != cmOkRC )
    return rc;

  p->alpha = alpha;
  p->flags = flags;

  // allocate the delay line
  p->dV = cmMemResizeZ(cmSample_t,p->dV,p->fhN);
  p->di = 0;

  // allocate the linear buffer
  p->xV  = cmMemResizeZ(cmSample_t,p->xV,p->fhN);
  p->t0V = cmMemResizeZ(cmComplexR_t,p->t0V,p->fhN);
  p->t1V = cmMemResizeZ(cmComplexR_t,p->t1V,p->fhN);

  // allocate the window function
  p->wndV = cmMemResizeZ(cmSample_t,p->wndV,p->fhN);
  cmVOS_Hann(p->wndV,p->fhN);

  // allocate the signal id matrix
  p->chN = chN;
  p->hN  = hN;
  p->binN = p->fft.binCnt; //atFftRealBinCount(p->fftH);
  p->fhM = cmMemResizeZ(cmComplexR_t, p->fhM, p->fhN  * chN);
  p->mhM = cmMemResizeZ(float,        p->mhM, p->binN * chN);
  cmPhatReset(p);

  if( cmIsFlag(p->flags,kDebugAtPhatFl)) 
    cmVectArrayClear(p->ftVa);
  
  return rc;

}

cmRC_t cmPhatFinal( cmPhat_t* p )
{ return cmOkRC; }

cmRC_t cmPhatReset(  cmPhat_t* p )
{
  p->di     = 0;
  p->absIdx = 0;
  cmVOS_Zero(p->dV,p->fhN);
  return cmOkRC;
}

cmRC_t cmPhatSetId(  cmPhat_t* p, unsigned chIdx, const cmSample_t* hV, unsigned hN )
{
  unsigned i;
  assert( chIdx < p->chN );
  assert( hN == p->hN );

  // Allocate a window vector
  cmSample_t* wndV = cmMemAllocZ(cmSample_t,hN);
  cmVOS_Hann(wndV,hN);

  // get ptr to output column in p->fhM[].
  cmComplexR_t* yV = p->fhM + (chIdx*p->fhN);

  // Zero pad hV[hN] to p->fhN;
  assert( hN <= p->fhN );
  cmVOS_Zero(p->xV,p->fhN);
  cmVOS_Copy(p->xV,hN,hV);

  // Apply the window function to the id signal
  if(cmIsFlag(p->flags,kHannAtPhatFl) )
    cmVOS_MultVVV(p->xV,hN,hV,wndV);

  // take FFT of id signal. The result is in fft->complexV and fft->magV,phsV
  cmFftExecSR(&p->fft, p->xV, p->fhN );

  // Store the magnitude of the id signal
  //atFftComplexAbs(p->mhM + (chIdx*p->binN), yV,     p->binN);
  cmVOF_CopyR(p->mhM + (chIdx*p->binN), p->binN, p->fft.magV );

  // Scale the magnitude
  cmVOS_MultVS(   p->mhM + (chIdx*p->binN), p->binN, p->alpha);

  // store the complex conjugate of the FFT result in yV[]
  //atFftComplexConj(yV,p->binN);
  for(i=0; i<p->binN; ++i)
    yV[i] = cmCconjR(p->fft.complexV[i]);

  cmMemFree(wndV);

  return cmOkRC;
}

cmSample_t* _cmPhatReadVector( cmCtx* ctx, cmPhat_t* p, const char* fn, unsigned* vnRef )
{
  cmVectArray_t* vap = NULL;
  cmSample_t*    v   = NULL;
  cmRC_t         rc  = cmOkRC;
  
  // instantiate a VectArray from a file
  if( (vap = cmVectArrayAllocFromFile(ctx, fn )) == NULL )
  {
    rc = cmCtxRtCondition(&p->obj,cmSubSysFailRC,"Id component vector file read failed '%s'.",fn);
    goto errLabel;
  }

  // get the count of elements in the vector
  *vnRef = cmVectArrayEleCount(vap);

  // allocate memory to hold the vector
  v = cmMemAlloc(cmSample_t,*vnRef);

  // copy the vector from the vector array object into v[]
  if((rc = cmVectArrayGetF(vap,v,vnRef)) != cmOkRC )
  {
    cmMemFree(v);
    v = NULL;
    rc = cmCtxRtCondition(&p->obj,cmSubSysFailRC,"Id component vector copy out failed '%s'.",fn);
    goto errLabel;
  }

  cmRptPrintf(p->obj.err.rpt,"%i : %s",*vnRef,fn);
  

 errLabel:
  cmVectArrayFree(&vap);

  return v;
}


cmRC_t   cmPhatExec(   cmPhat_t* p, const cmSample_t* xV, unsigned xN )
{
  unsigned n = cmMin(xN,p->fhN-p->di);

  // update the delay line
  cmVOS_Copy(p->dV+p->di,n,xV);

  if( n < xN )
    cmVOS_Copy(p->dV,xN-n,xV+n);

  p->di      = cmModIncr(p->di,xN,p->fhN);

  // p->absIdx is the absolute sample index associated with di
  p->absIdx += xN;  

  return cmOkRC;
}


void cmPhatChExec( 
    cmPhat_t* p, 
    unsigned  chIdx,
    unsigned  sessionId,
    unsigned  roleId)
{

  unsigned n0 = p->fhN - p->di;
  unsigned n1 = p->fhN - n0;

  // Linearize the delay line into xV[]
  cmVOS_Copy(p->xV,    n0, p->dV + p->di );
  cmVOS_Copy(p->xV+n0, n1, p->dV         );

  if( cmIsFlag(p->flags,kDebugAtPhatFl)) 
    cmVectArrayAppendS(p->ftVa, p->xV, p->fhN );

  // apply a window function to the incoming signal
  if( cmIsFlag(p->flags,kHannAtPhatFl) )
    cmVOS_MultVV(p->xV,p->fhN,p->wndV);
  
  // Take the FFT of the delay line.
  // p->t0V[p->binN] = fft(p->xV)
  //atFftRealForward(p->fftH, p->xV, p->fhN, p->t0V, p->binN );
  cmFftExecSR(&p->fft, p->xV, p->fhN );
 
  // Calc. the Cross Power Spectrum (aka cross spectral density) of the
  // input signal with the id signal.
  // Note that the CPS is equivalent to the Fourier Transform of the
  // cross-correlation of the two signals.
  // t0V[] *= p->fhM[:,chIdx]
  //atFftComplexMult( p->t0V, p->fhM + (chIdx * p->fhN), p->binN );
  cmVOCR_MultVVV( p->t0V, p->fft.complexV, p->fhM + (chIdx * p->fhN), p->binN);
  
  // Calculate the magnitude of the CPS.
  // xV[] = | t0V[] |
  cmVOCR_Abs( p->xV, p->t0V, p->binN );
  
  // Weight the CPS by the scaled magnitude of the id signal
  // (we want to emphasize the limited frequencies where the
  //  id signal contains energy)
  // t0V[] *= p->mhM[:,chIdx]
  if( p->alpha > 0 )
    cmVOCR_MultVFV( p->t0V, p->mhM + (chIdx*p->binN), p->binN);

  // Divide through by the magnitude of the CPS
  // This has the effect of whitening the spectram and thereby
  // minimizing the effect of the magnitude correlation 
  // while maximimizing the effect of the phase correlation.
  // 
  // t0V[] /= xV[]
  cmVOCR_DivVFV( p->t0V, p->xV, p->binN );

  // Take the IFFT of the weighted CPS to recover the cross correlation.
  // xV[] = IFFT(t0V[])
  cmIFftExecRS( &p->ifft, p->t0V );

  // Normalize the result by the length of the transform.
  cmVOS_DivVVS( p->xV, p->fhN, p->ifft.outV, p->fhN );

  // Shift the correlation spike to mark the end of the id
  cmVOS_Rotate( p->xV, p->fhN, -((int)p->hN) );

  // normalize by the length of the correlation
  cmVOS_DivVS(p->xV,p->fhN,p->fhN);

  if( cmIsFlag(p->flags,kDebugAtPhatFl))
  {
    cmVectArrayAppendS(p->ftVa, p->xV, p->fhN );

    cmSample_t v[] = { sessionId, roleId };
    cmVectArrayAppendS(p->ftVa, v, sizeof(v)/sizeof(v[0]));
  }

}

cmRC_t cmPhatWrite( cmPhat_t* p, const char* dirStr )
{
  cmRC_t rc = cmOkRC;
  
  if( cmIsFlag(p->flags, kDebugAtPhatFl)) 
  {
    const char* path = NULL;

    if( cmVectArrayCount(p->ftVa) )
      if((rc = cmVectArrayWrite(p->ftVa, path = cmFsMakeFn(path,"cmPhatFT","va",dirStr,NULL) )) != cmOkRC )
        rc = cmCtxRtCondition(&p->obj,cmSubSysFailRC,"PHAT debug file write failed.");
    
    cmFsFreeFn(path);
  }
  
  return rc;
}


//=======================================================================================================================
// 
//

cmReflectCalc_t* cmReflectCalcAlloc( cmCtx* ctx, cmReflectCalc_t* p, const cmGoldSigArg_t* gsa, float phat_alpha, unsigned phat_mult )
{
  cmReflectCalc_t* op = cmObjAlloc(cmReflectCalc_t,ctx,p);
  cmRC_t rc = cmOkRC;
  
  // allocate the Gold code signal generator
  if( (op->gs = cmGoldSigAlloc(ctx,NULL,NULL)) == NULL )
  {
    rc = cmCtxRtCondition(&p->obj,cmSubSysFailRC,"Gold sig allocate failed.");
    goto errLabel;
  }

  // allocate the PHAT object
  if( (op->phat = cmPhatAlloc(ctx,NULL,0,0,0,0,0)) == NULL )
  {
    rc = cmCtxRtCondition(&p->obj,cmSubSysFailRC,"PHAT allocate failed.");
    goto errLabel;
  }

  op->phVa  = cmVectArrayAlloc(ctx,kSampleVaFl);
  op->xVa   = cmVectArrayAlloc(ctx,kSampleVaFl);
  op->yVa   = cmVectArrayAlloc(ctx,kSampleVaFl);

  // allocate 'this'
  if( gsa != NULL )  
    rc = cmReflectCalcInit(op,gsa,phat_alpha,phat_mult);
      

 errLabel:
      if( rc != cmOkRC )
        cmReflectCalcFree(&op);
                        
  
  return op;
  
}

cmRC_t cmReflectCalcFree( cmReflectCalc_t** pp )
{
  cmRC_t rc = cmOkRC;

  if( pp == NULL || *pp == NULL )
    return rc;

  cmReflectCalc_t* p = *pp;

  cmReflectCalcWrite(p,"/Users/kevin/temp/kc");
  
  if((rc = cmReflectCalcFinal(p)) != cmOkRC )
    return rc;

  cmMemFree(p->t0V);
  cmMemFree(p->t1V);
  cmVectArrayFree(&p->phVa);
  cmVectArrayFree(&p->xVa);
  cmVectArrayFree(&p->yVa);
  cmGoldSigFree(&p->gs); 
  cmPhatFree(&p->phat);
  
  cmMemFree(p);
  *pp = NULL;

  return rc;
}

cmRC_t cmReflectCalcInit( cmReflectCalc_t* p, const cmGoldSigArg_t* gsa, float phat_alpha, unsigned phat_mult )
{
  cmRC_t rc;
  if((rc = cmReflectCalcFinal(p)) != cmOkRC )
    return rc;

  //  initialize the Gold code signal generator
  if((rc = cmGoldSigInit(p->gs,gsa)) != cmOkRC )
  {
    rc = cmCtxRtCondition(&p->obj,cmSubSysFailRC,"Gold code signal initialize failed.");
    goto errLabel;
  }
  
  unsigned phat_chN   = 1;
  unsigned phat_hN    = p->gs->sigN;
  unsigned phat_flags = 0;
  unsigned phat_chIdx = 0;
  
  // initialize the PHAT
  if((rc = cmPhatInit(p->phat,phat_chN,phat_hN,phat_alpha,phat_mult,phat_flags)) != cmOkRC )
  {
    rc = cmCtxRtCondition(&p->obj,cmSubSysFailRC,"PHAT intialize failed.");
    goto errLabel;
  }

  // register a target signal with the PHAT
  if((rc = cmPhatSetId( p->phat, phat_chIdx, p->gs->ch[phat_chIdx].mdV, p->gs->sigN )) != cmOkRC )
  {
    rc = cmCtxRtCondition(&p->obj,cmSubSysFailRC,"PHAT signal registration failed.");
    goto errLabel;
  }

  p->xi     = 0;

  p->tN     = 5;
  p->t0V    = cmMemResizeZ(unsigned,p->t0V,p->tN);
  p->t1V    = cmMemResizeZ(unsigned,p->t1V,p->tN);
  p->ti     = 0;
  p->t      = 0;
  
 errLabel:
  
  return rc;
}

cmRC_t cmReflectCalcFinal( cmReflectCalc_t* p )
{
  cmGoldSigFinal(p->gs);
  cmPhatFinal(p->phat);
  return cmOkRC;
}

/*
cmRC_t cmReflectCalcExec( cmReflectCalc_t* p, const cmSample_t* xV, cmSample_t* yV, unsigned xyN )
{
  unsigned i;

  // feed audio into the PHAT's buffer
  cmPhatExec(p->phat,xV,xyN);

  // fill the output buffer
  for(i=0; i<xyN; ++i,++p->xi)
  {
    if( p->xi < p->gs->sigN )
      yV[i] = p->gs->ch[0].mdV[p->xi];
    else
      yV[i] = 0;

    // if the PHAT has a complete buffer
    if( p->xi == p->phat->fhN )
    {
      p->xi = 0;

      // execute the correlation
      cmPhatChExec(p->phat,0,0,0);

      // p->phat->xV[fhN] now holds the correlation result
      
      if( p->phVa != NULL )
        cmVectArrayAppendS(p->phVa,p->phat->xV,p->phat->fhN );
    }
    
  }

  cmVectArrayAppendS(p->xVa,xV,xyN);
  cmVectArrayAppendS(p->yVa,yV,xyN);

  return cmOkRC;
}
*/

cmRC_t cmReflectCalcExec( cmReflectCalc_t* p, const cmSample_t* xV, cmSample_t* yV, unsigned xyN )
{
  unsigned i;

  unsigned xyN0 = xyN;

  while(xyN0)
  {
    // feed audio into the PHAT's buffer
    unsigned di = p->phat->di;
    unsigned n  = cmMin(xyN0,p->phat->fhN - di );
    
    cmPhatExec(p->phat,xV,n);

    if( di + n == p->phat->fhN )
    {
      // execute the correlation
      cmPhatChExec(p->phat,0,0,0);
      
      // p->phat->xV[fhN] now holds the correlation result

      // get the peak index
      p->t1V[p->ti] = cmVOS_MaxIndex(p->phat->xV,p->phat->fhN,1);

      printf("%i %i\n",p->t,p->t1V[p->ti]);

      p->ti = (p->ti + 1) % p->tN;

      
      // store the correlation result
      if( p->phVa != NULL )
        cmVectArrayAppendS(p->phVa,p->phat->xV,p->phat->fhN );
      
    }

    xyN0 -= n;

  }
  
  // fill the output buffer
  for(i=0; i<xyN; ++i)
  {
    if( p->xi == 0 )
      p->t0V[p->ti] = p->t + i;
    
    if( p->xi < p->gs->sigN )
      yV[i] = p->gs->ch[0].mdV[p->xi];
    else
      yV[i] = 0;

    p->xi = (p->xi+1) % p->phat->fhN;
  }

  p->t += xyN;
  
  if( p->xVa != NULL )
    cmVectArrayAppendS(p->xVa,xV,xyN);

  if( p->yVa != NULL )
    cmVectArrayAppendS(p->yVa,yV,xyN);

  return cmOkRC;
}

cmRC_t cmReflectCalcWrite( cmReflectCalc_t* p, const char* dirStr )
{
  cmRC_t rc = cmOkRC;
  
  if( p->xVa != NULL) 
    cmVectArrayWriteDirFn(p->xVa, dirStr, "reflect_calc_x.va" );

  if( p->yVa != NULL )
    cmVectArrayWriteDirFn(p->yVa, dirStr, "reflect_calc_y.va" );

  if( p->phVa != NULL )
    cmVectArrayWriteDirFn(p->phVa,dirStr, "reflect_calc_ph.va");
  
  return rc;
}

//=======================================================================================================================
// 
//
cmNlmsEc_t* cmNlmsEcAlloc( cmCtx* ctx, cmNlmsEc_t* ap, double srate, float mu, unsigned hN, unsigned delayN )
{
  cmNlmsEc_t* p = cmObjAlloc(cmNlmsEc_t,ctx,ap);

  bool debugFl = false;
  
  // allocate the vect array's
  p->uVa = debugFl ? cmVectArrayAlloc(ctx, kFloatVaFl ) : NULL;
  p->fVa = debugFl ? cmVectArrayAlloc(ctx, kFloatVaFl ) : NULL;
  p->eVa = debugFl ? cmVectArrayAlloc(ctx, kFloatVaFl ) : NULL;
   
  
  if( srate != 0 )  
    if( cmNlmsEcInit(p,srate,mu,hN,delayN) != cmOkRC )
      cmNlmsEcFree(&p);

  return p;

}

cmRC_t      cmNlmsEcFree( cmNlmsEc_t** pp )
{
   cmRC_t rc = cmOkRC;

  if( pp == NULL || *pp == NULL )
    return rc;

  cmNlmsEc_t* p = *pp;
  if((rc = cmNlmsEcFinal(p)) != cmOkRC )
    return rc;

  cmMemFree(p->wV);
  cmMemFree(p->hV);
  cmVectArrayFree(&p->eVa);
  cmObjFree(pp);

  return rc;
 
}

cmRC_t      cmNlmsEcInit( cmNlmsEc_t* p, double srate, float mu, unsigned hN, unsigned delayN )
{
  cmRC_t rc = cmOkRC;

  if((rc = cmNlmsEcFinal(p)) != cmOkRC )
    return rc;

  assert( srate >= hN );
  assert( srate >= delayN );
  
  p->mu     = mu;
  p->hN     = hN;
  p->delayN = cmMax(1,delayN);
  p->dN     = srate;
  p->delayV = cmMemResizeZ(cmSample_t, p->delayV, srate );
  p->di     = 0;
  p->wV     = cmMemResizeZ(double,p->wV,srate);
  p->hV     = cmMemResizeZ(double,p->hV,srate);
  p->w0i    = 0;
  
  return rc;
}
    
cmRC_t      cmNlmsEcFinal( cmNlmsEc_t* p )
{ return cmOkRC; }

cmRC_t      cmNlmsEcExec( cmNlmsEc_t* p, const cmSample_t* xV, const cmSample_t* fV, cmSample_t* yV, unsigned xyN )
{
  // See: http://www.eit.lth.se/fileadmin/eit/courses/ett042/CE/CE2e.pdf
  // and  http://www.eit.lth.se/fileadmin/eit/courses/ett042/CE/CE3e.pdf
  unsigned i;
  for(i=0; i<xyN; ++i)
  {
    double     y = 0;
    unsigned   k = 0;
    double     a = 0.001;
    unsigned   j;

    // Insert the next sample into the filter delay line.
    // Note that rather than shifting the delay line on each iteration we
    // increment the input location and then align it with the zeroth
    // weight below.
    p->hV[p->w0i] = p->delayV[ p->di ];
    
    p->delayV[ p->di ] = xV[i];

    p->di = (p->di + 1) % p->delayN;

    // calculate the output of the delay w0i:hN 
    for(j=p->w0i,k=0; j<p->hN; ++j,++k)
      y += p->hV[j] * p->wV[k];

    // calcuate the output of the delay 0:w0i
    for(j=0; j<p->w0i; ++j,++k)
      y += p->hV[j] * p->wV[k];

    // calculate the error which is also the filter output
    double e = fV[i] - y;
    yV[i] = e;

    // 
    double z = 0;
    for(j=0; j<p->hN; ++j)
      z += p->hV[j] * p->hV[j];

    // update weights 0 through w0i
    for(j=p->w0i,k=0; j<p->hN; ++j,++k)
      p->wV[k] += (p->mu/(a + z)) * p->hV[j] * e;

    // update weights w0i through hN
    for(j=0; j<p->w0i; ++j,++k)
      p->wV[k] += (p->mu/(a + z)) * p->hV[j] * e;

    // advance the delay
    p->w0i = (p->w0i+1) % p->hN;

  }

  if( p->uVa != NULL )
    cmVectArrayAppendS(p->uVa,xV,xyN);
  
  if( p->fVa != NULL )
    cmVectArrayAppendS(p->fVa,fV,xyN);

  if( p->eVa != NULL )
    cmVectArrayAppendS(p->eVa,yV,xyN);
   

  return cmOkRC;
}


cmRC_t      cmNlmsEcWrite( cmNlmsEc_t* p, const cmChar_t* dirStr )
{

  if( p->uVa != NULL )
    cmVectArrayWriteDirFn(p->uVa, dirStr, "nlms_unfiltered.va");

  if( p->fVa != NULL )
    cmVectArrayWriteDirFn(p->fVa, dirStr, "nlms_filtered.va");

  if( p->eVa != NULL )
    cmVectArrayWriteDirFn(p->eVa, dirStr, "nlms_out.va");
  
  return cmOkRC;
}


void cmNlmsEcSetMu(     cmNlmsEc_t* p, float mu )
{
  if( mu < 0 )
    p->mu = 0.0001;
  else
    if( mu >= 1 )
      p->mu = 0.99;
    else
      p->mu = mu;
}

void cmNlmsEcSetDelayN( cmNlmsEc_t* p, unsigned delayN )
{
  if( delayN > p->dN)
    delayN = p->dN;
  else
    if( delayN < 1 )
      delayN = 1;
  
  cmVOS_Zero(p->delayV,p->delayN);
  p->delayN = delayN;
}

void cmNlmsEcSetIrN(    cmNlmsEc_t* p, unsigned hN )
{
  if( hN > p->dN )
    hN = p->dN;
  else
    if( hN < 1 )
      hN = 1;

  cmVOD_Zero(p->wV,p->hN);
  cmVOD_Zero(p->hV,p->hN);
  p->hN = hN;
}

//=======================================================================================================================
// 
//

cmSeqAlign_t* cmSeqAlignAlloc(  cmCtx* ctx, cmSeqAlign_t* ap )
{
  cmSeqAlign_t* p = cmObjAlloc(cmSeqAlign_t,ctx,ap);

  if( cmSeqAlignInit(p) != cmOkRC )
    cmSeqAlignFree(&p);

  return p;  
}

cmRC_t        cmSeqAlignFree(   cmSeqAlign_t** pp )
{
  cmRC_t rc = cmOkRC;

  if( pp == NULL || *pp == NULL )
    return rc;

  cmSeqAlign_t* p = *pp;
  if((rc = cmSeqAlignFinal(p)) != cmOkRC )
    return rc;

  while( p->seqL != NULL )
  {
    while( p->seqL->locL != NULL )
    {
      cmSeqAlignLoc_t* lp = p->seqL->locL->link;
      cmMemFree(p->seqL->locL->vV);
      cmMemFree(p->seqL->locL);
      p->seqL->locL = lp;
    }

    cmSeqAlignSeq_t* sp = p->seqL->link;
    cmMemFree(p->seqL);
    p->seqL = sp;
  }
  
  cmObjFree(pp);

  return rc;
}

cmRC_t        cmSeqAlignInit(   cmSeqAlign_t* p )
{ return cmOkRC; }

cmRC_t        cmSeqAlignFinal(  cmSeqAlign_t* p )
{ return cmOkRC; }

cmSeqAlignSeq_t* _cmSeqAlignIdToSeq( cmSeqAlign_t* p, unsigned seqId )
{
  cmSeqAlignSeq_t* sp = p->seqL;
  for(; sp!=NULL; sp=sp->link)
    if( sp->id == seqId )
      return sp;
  return NULL;
}

cmSeqAlignLoc_t* _cmSeqAlignIdToLoc( cmSeqAlignSeq_t* sp, unsigned locId )
{
  cmSeqAlignLoc_t* lp = sp->locL;
  for(; lp!=NULL; lp=lp->link)
  {
    // if the locId's match 
    if( lp->id == locId )
      return lp;

    if( (lp->link != NULL && lp->link->id > locId) || lp->link==NULL )
      return lp;  // return record previous to locId 
  }

  // return NULL: locId is less than all other locations id's in the list
  return lp;
}

cmRC_t        cmSeqAlignInsert( cmSeqAlign_t* p, unsigned seqId, unsigned locId, unsigned value )
{
  cmSeqAlignSeq_t* sp;

  // if the requested sequence does not already exist ...
  if((sp = _cmSeqAlignIdToSeq(p,seqId)) == NULL )
  {
    // ... then create it
    sp       = cmMemAllocZ(cmSeqAlignSeq_t,1);
    sp->id   = seqId;

    if( p->seqL == NULL )
      p->seqL = sp;
    else
    {
      cmSeqAlignSeq_t* s0 = p->seqL;
      while( s0->link != NULL )
        s0 = s0->link;

      s0->link = sp;
      
    }    
  }
  assert(sp != NULL);

  cmSeqAlignLoc_t* lp;

  // if the requested location does not exist in the requested sequence ... 
  if((lp = _cmSeqAlignIdToLoc(sp,locId)) == NULL || lp->id != locId)
  {
    // ... then create it
    cmSeqAlignLoc_t* nlp = cmMemAllocZ(cmSeqAlignLoc_t,1);
    nlp->id = locId;

    // if lp is NULL then link nlp as first record in sequence
    if( lp == NULL )
    {      
      // make new loc recd first on the list
      nlp->link = sp->locL;
      sp->locL  = nlp;
    }
    else // otherwise link nlp after lp
    {
      nlp->link = lp->link;
      lp->link  = nlp;
    }

    lp = nlp;
  }

  assert( lp!=NULL );

  // insert the new value
  lp->vV = cmMemResizeP(unsigned,lp->vV,lp->vN+1);
  lp->vV[ lp->vN ] = value;
  lp->vN += 1;

  return cmOkRC;
}

double _cmSeqAlignCompare( const cmSeqAlignLoc_t* l0, const cmSeqAlignLoc_t* l1)
{
  double dist = 0;
  unsigned i=0;
  for(i=0; i<l0->vN; ++i)
  {
    unsigned j=0;
    for(j=0; j<l1->vN; ++j)
      if( l0->vV[i] == l1->vV[j] )
        break;

    if( l0->vV[i] != l1->vV[j] )
      dist += 1.0;
  }
  
  return dist;
}

cmRC_t cmSeqAlignExec(   cmSeqAlign_t* p )
{
  
  return cmOkRC;
}

void _cmSeqAlignReportLoc( cmRpt_t* rpt, const cmSeqAlignLoc_t* lp )
{
  //cmRptPrintf(rpt,"%5i : ",lp->id);
  
  unsigned i;
  for(i=0; i<lp->vN; ++i)
  {
    //cmRptPrintf(rpt,"%3i ",lp->vV[i]);
    cmRptPrintf(rpt,"%4s ",cmMidiToSciPitch(lp->vV[i],NULL,0));
  }

  cmRptPrintf(rpt," | ");
}

void cmSeqAlignReport( cmSeqAlign_t* p, cmRpt_t* rpt )
{
  cmSeqAlignLoc_t* slp = p->seqL->locL;

  for(; slp!=NULL; slp=slp->link)
  {
    cmRptPrintf(rpt,"%5i : ",slp->id);
    
    // report the next location on the first sequence as the reference location
    _cmSeqAlignReportLoc( rpt, slp );

    // for each remaining sequence 
    cmSeqAlignSeq_t* sp = p->seqL->link;
    for(; sp!=NULL; sp=sp->link)
    {
      // locate the location with the same id as the reference location ...
      cmSeqAlignLoc_t* lp;
      
      if((lp = _cmSeqAlignIdToLoc(sp,slp->id)) != NULL && lp->id == slp->id)
      {
        _cmSeqAlignReportLoc(rpt,lp); // ... and report it
      }
      
    }

    cmRptPrintf(rpt,"\n");
  }
}